Best Medical Billing Software

Medical organizations use medical billing software to create and manage invoices for the services that they provide. Healthcare institutions require certain industry-specific billing features as medical invoicing varies according to patient diagnostic, treatment, and health care coverage. Medical billing software includes support for compliance with healthcare regulations such as the the Health Insurance Portability and Accountability Act (HIPAA). Medical billing solutions can increase the accuracy and the speed of the billing process for healthcare organizations. Some advanced solutions also provide functionality for revenue management or profitability analysis.

Medical billing software needs to integrate with medical practice management software which holds patient information, as well as with accounting software which processes payments. Integration with benefit carriers is also required for electronic invoices or claim submissions.

To qualify for inclusion in the Medical Billing category, a product must:

  • Provide templates and forms for different types of invoices
  • Generate invoices for multiple treatments, medication, radiology, or lab tests
  • Send bills electronically to patients, other medical providers, or insurance companies
  • Manage the claim process from capture to reimbursement
  • Include features for automated matching between invoices and orders
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    Medical Billing reviews by real, verified users. Find unbiased ratings on user satisfaction, features, and price based on the most reviews available anywhere.

    With more than 65,000 members at 9,000 clinics, WebPT is the leading rehab therapy platform for enhancing patient care and fueling business growth. Ideal for outpatient organizations of all sizes, WebPT makes it easy for therapy professionals to transition from paper and outdated software to a user-friendly, cloud-based solution. With WebPT, therapists, directors, owners, billers, and front office staff have access to patients’ medical records anywhere, anytime, from any web-enabled device. WebPT’s web-based application alleviates any large, upfront investments; costly IT support; or bulky, in-office servers. It provides an integrated method to manage patient documents and progress as well as clinic schedules, analytics reporting, and billing. WebPT has an intuitive workflow, allowing therapists to efficiently create compliant and consistent documentation. In addition to documentation, WebPT offers a front office package that includes the tools necessary to run an organized clinic, including a multiuser scheduler with appointment reminders and the ability to upload external patient documents. Through WebPT’s suite of reporting tools, therapists and staff can track productivity, cancellations, and no-shows as well as referrals. Therapists can also benchmark and track patient progress through WebPT’s outcomes tracking product. Lastly, WebPT’s billing options—including the WebPT Billing Service and integrations with several certified billing partners—ensure clinics receive reliable, accurate claims submission and processing as well as speedy, maximized reimbursements. With WebPT, rehab therapists have a modern, intuitive platform that’s well-suited to their needs, empowering them to be better in business—and more importantly, enabling them to spend less time on documentation and more time with their patients. Headquartered in the historic Warehouse District in downtown Phoenix, WebPT has a 99.9% uptime rate and a 99.5% customer retention rate. It was named to the Inc. 5000 list of the nation's fastest-growing companies four years in a row.

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    An integrated electronic medical record and practice management system for practices of all sizes.


    NextGen Healthcare delivers a comprehensive, integrated technology and services platform tailored to fit the needs of ambulatory and specialty practices of all sizes. The company powers national interoperability that lets users easily exchange patient data across disparate systems, access health information regardless of where patients are treated, and personalize and streamline patient communications. The company’s analytics offerings enable population health management and risk stratification to help practices accurately identify gaps in care and achieve clinical and financial value. Their clinical care solutions simplify and integrate provider workflows and lessen administrative tasks to free clinicians to focus on care and optimize the caregiver experience. By leveraging their financial management offerings, the company aligns financial and clinical solutions including end-to-end revenue cycle management (RCM) to better align with practices’ goals, improve their competitive position, and lower their cost of health IT ownership.

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    athenahealth is a leading provider of network-enabled services and mobile applications for medical groups and health systems.


    At the forefront of interoperability, Brightree’s cloud-based business management software and integrated solutions help HME/DMEs to generate new cash flows, share data seamlessly with referral sources, dramatically streamline operations and improve profitability. Through a combination of software, services, training and consulting, HME providers can simplify their business processes and dramatically improve their financial performance.


    AdvancedBilling: Drive revenue with ease. All the tools you need to manage your A/R and claims processes in one database. Our robust clearinghouse automates manual processes and improves workflow. ClaimsCenter gives you auto-generated worklists, claims tracking & centralized billing. Easily identify issues with ClaimInspector that automatically scrubs claims for potential errors. Results are astonishing with nearly 100% first-pass claim acceptance. Healthier practice = healthier patients.


    NueMD is an easy-to-use, cloud-based medical billing system that shortens the reimbursement cycle and increases efficiency in practices. Serve your clients better with NueMD's detailed reports on revenue trends, collection aging, and payment status. With an established client base of over 24,000 users in 50 states, NueMD is the secure choice for medical billing.


    TherapyNotes™ is the most trusted online practice management and EHR software for behavioral health practices of all sizes. With over 60,000 users, we're considered the largest platform for mental health professionals, offering the most intuitive software and best customer support in the industry. Our streamlined scheduling, notes, billing, and a custom client portal — plus unlimited support and superior security — can help optimize how you manage your practice, letting you focus less on administrative tasks and more on your clients' needs. We offer: • Streamlined scheduling and a personal to-do list that automatically generates tasks based on past activity • Powerful form-based notes, designed specifically for behavioral health • Electronic insurance claims, ERA payment posting, and credit card processing • HIPAA compliancy, keeping your data encrypted, secured, and backed up regularly To learn more about TherapyNotes™, visit TherapyNotes.com, and receive your first month completely free.


    Phreesia provides a suite of robust applications to effectively manage the patient intake process. With customizable, scalable and cost-effective solutions, Phreesia engages patients in their care with a modern, consistent experience, while enabling healthcare organizations of all sizes to expand staff capacity and enhance clinical care.


    PointClickCares Financial Management solutions helps senior living facilities and other businesses run efficiently and fulfill their mission.


    Therabill started in 2005 after speech-language pathologist Cynthia Dundas went on the hunt for software that could help her cut down the amount of time it took to bill insurances.


    Azalea provides an electronic health record (EHR) platform, practice management (PM), revenue cycle management (RCM) and telehealth solutions for ambulatory and hospital care settings. Designed for efficiency, the cloud-based infrastructure drives cost savings in hardware, speeds deployment and training time, and increases application availability. Azalea is suitable for community and rural health care settings, including multiple speciality practices. Azalea EHR is 2015 ONC certified and supports Promoting Interoperability (PI). Users can document SOAP notes, send orders and capture billing from a single screen. The HIPAA-compliant telehealth platform is fully integrated and enables real-time charting. Patient records can be accessed at home, in the practice or in the hospital. Azalea also offers a fully-integrated mobile application, appointment reminders and patient portal. A data integrity validation feature will check various field entries (such as date of birth, insurance, and address) and then notify users of inaccuracies.


    CareCloud Concierge is a complete revenue cycle management solution that allows you to shift the heavy lifting around getting paid, so you can focus more on patients and worry less about collections. Modern RCM software and real-time analytics combine with our specialized back-office team to help your practice improve profitability, eliminate administrative burdens, and adapt better to industry change.



    iClaims is a centralized billing system that allows you to enter attendance and visits with automated error checks, rate calculations, unit deductions, and other feature that help manage entry time.


    Kareo makes it easier and more rewarding for you to run an independent medical practice. We offer the only cloud-based, clinical and business management technology platform dedicated to serving the unique needs of independent practices. Our software helps you find and engage with patients, run a smarter business, provide better care, and get paid faster. From the front office to your back-end billing, Kareo Practice Management streamlines the way you work. It’s easy to use and proven powerful by the more than 40,000 providers that trust it for their small practices. Unlike other companies that built their offering for large medical groups or hospitals, Kareo is purpose-built for the work flows and unique needs of the independent practice. The result is an affordably-priced platform without the bells and whistles that you don’t need.

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    Compulink’s all-in-one solution combines our expert billing services with the industry’s leading EHR and Practice Management solution to increase your income and take the pain out of getting paid


    Aprima’s proven practice management (PM) solution takes care of business with smart, flexible and intuitive tools that enable advanced scheduling, patient registration, billing, coding and claims management, business analytics and more for better, faster reimbursements and improved staff satisfaction.


    Web-based OHIP Billing software with the easiest to use interface in the industry. Access claims from any computer with internet access.


    PulsePro Practice Management is a modular software solution that allows you to have a customized practice management solution with features like master patient index, scheduling, revenue management, claims management and more.


    Therapist is a professional medical practice management and billing software program for physicians and therapist that is optimized for practitioners of ongoing therapies in the fields of mental health, physical therapy, chiropractic, and others.


    Valant was founded in 2005 to provide behavioral health providers with EHR technology to streamline administration and empower what’s most important: improving outcomes. Our completely new platform was born from modern, cloud architecture including an elastic and infinitely scalable data model, mobile app-inspired user experience, and an on-demand ability to respond to change without additional investment in time, money, or training.


    VelociDoc is an is a web based EMR software that is integrated with PVM practice management system that streamlines the process of transmitting demographic, coding, and charge entry data a single database reporting.


    Do-it-yourself medical billing software for physicians and allied health professionals.


    CMS-1500 Software allows you to submit your claims by paper or electronically, import via Excel, with features such as submitting claims electronically, type information on screen, and save and load claims anywhere on your hard drive.


    EDIinsight helps manage the entire billing and collections process from EDI submissions to workflow management.


    EZ Billing is a practice management solution that allows you to receive reimbursements via electronic claim processing, track insurance payments and billing information, is HIPAA compliant for patient security and integrated with EZ EHR.


    Medical Billing Assistant, our flagship product, is a Microsoft Windows based medical billing and practice management software package. MBA is based on Microsoft SQL Server technology and is 100 percent HIPAA compliant.


    Personal Billing Assistant (PBA) is a web based OHIP billing application that can access claims from any computer with an internet connection, It provides an incredibly simple interface and a vast array of billing features.


    XIFIN RPM embodies a unique approach to laboratory billing that goes well beyond a billing system to provide a complete Revenue Cycle Management solution. Designed for the high-speed laboratory environment, XIFIN RPM manages and automates medical claims filing, reduces the risks associated with regulatory compliance, and provides visibility into operational and financial performance.


    Xpeditor can help you manage efficiency, cash flow, and days in A/R for hospitals and other health care organizations of every size.


    AdminiCare is a web-based inventory management system for long-term care facilities that provides a real-time interface with medical supply and service providers.


    American Medical Software is proud to be celebrating over 33 years of excellence in the electronic medical software industry. Building upon our excellent company history, AMS continues to lead the industry by providing and maintaining the greatest value in medical office software systems for physicians of all specialties. Since our beginning in 1984, we have sold thousands of systems nationwide. Our ONC HIT Certified Ultra Charts™ system includes electronic medical records, patient portal, medical billing & management, and appointment scheduling. Visit americanmedical.com for more information.


    CareCloud Breeze is the fastest patient registration and intake solution to seamless integration into your PM and EHR, Breeze makes every interaction between patients and your practice easier than ever.


    CentralReach is a leading EHR and practice management platform that enables applied behavioral analysis (ABA) clinics to produce superior outcomes for their patients. Powered by its acquisition of Chartlytics, the company is revolutionizing the ABA space with cutting-edge solutions including precision teaching, clinical data collection, scheduling, billing, and learning management. Trusted by more than 50,000 clinicians and educators, CentralReach is committed to ongoing product improvement, market-leading industry expertise, world-class client satisfaction and support of the ABA community to propel industry practitioners into a new era of excellence.


    DaisyBill builds revenue cycle management (RCM) software that solves workers’ comp billing


    eTHOMAS (Total Health Office Management Automation System) is a premiere healthcare management and billing software product. It makes office efficiency, accuracy, and patient information and confidentiality (HIPAA) a working and integrated function of your office.


    Experian Healthcare enables medical groups to evaluate contract performance, verify reimbursement and assess financial implications of new contracts.


    Facets is a modular system integrating consumer, care, claims and revenue management to help organizations meet their business goals.


    Healthpac Billing is a customizable medical billing software to provide you with what you need to run your practice smoothly.


    HorizonMIS allows you to control your medical practice and manage information with accuracy with features like, clearing house, HIPAA compliant claims, electronic office management, integrated letter processing, and more.


    iSALUS Billing and Scheduling Services is a billing and scheduling software that has integrated clearinghouse service that allows you to get your claims paid, as well as submit e-claims, post ERA payments, verify patient insurance eligibility, and more.


    NaviNet Open Foundation consists of a series of layers: a platform, a set of network services, a suite of reimbursement-related and clinical applications, and a set of tools that customers can use to configure and customize the system.


    NexTech Revenue Management helps you keep track of your practice's profitability by managing reimbursement rates, denials, and coding compliance and helps your bottom line by managing inefficiency and overhead with automated electronic tools.


    NowMD Medical Billing is a patient accounting and practice management software designed for healthcare practices and medical billing services, with features to help you run your practice.


    OmniMD's Practice Management System offers comprehensive and powerful functionality throughout the financial lifecycle of your organization.


    Patch is a complete software platform for managing patients' healthcare plans across networks.


    Practice Management Ultra is an integrated tool to help manage your efficiency and revenue stream in any practice with 4 featured modules- appointment scheduling, electronic medical records, medical billing and management, and a patient portal.


    PracticeSuite Medical Billing allows you to manage your revenue cycle with features such as front office, management of clinical care, collections, measuring performance and going mobile.


    Medical Billing Software is a billing and coding software that allows you to have a customized medical billing and coding process that fits your business needs that includes outsourcing, patient balance processing, financial reports, and data migration.